Carnation DB

Dca25490.1

Annotation

6-exons
f-1
sp|B9HPH0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_768202#GO:0005524;GO:0004674#2F0P0C
sp|B9T4H9_RICCO#Protein kinase APK1B, chloroplast, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0000910#GO:0005524;GO:0004715;GO:0004674#3F0P0C
Repeat List (scaffold253)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25490.1	1	405	409	63.32	405	64	6e-146
Target_name	Start	End	Length	Cov(%)
sp\|B9HPH0_POPTR	1	389	391	99.48

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25490.1	20	382	409	58.43	363	65	2e-141
Target_name	Start	End	Length	Cov(%)
Os03t0821900-02	14	382	403	91.56

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold253	Augus-PASA	mRNA	145441	148493	.	-	.	ID=Dca25490.1;Parent=Dca25490
scaffold253	Augus-PASA	exon	145441	145928	.	-	.	ID=Dca25490.1.exon1;Parent=Dca25490.1
scaffold253	Augus-PASA	exon	146270	146393	.	-	.	ID=Dca25490.1.exon2;Parent=Dca25490.1
scaffold253	Augus-PASA	exon	146483	146625	.	-	.	ID=Dca25490.1.exon3;Parent=Dca25490.1
scaffold253	Augus-PASA	exon	146719	146854	.	-	.	ID=Dca25490.1.exon4;Parent=Dca25490.1
scaffold253	Augus-PASA	exon	147082	147362	.	-	.	ID=Dca25490.1.exon5;Parent=Dca25490.1
scaffold253	Augus-PASA	exon	148436	148493	.	-	.	ID=Dca25490.1.exon6;Parent=Dca25490.1