Dca2550.1
Annotation
- 2-exons
- f-1
- sp|B9HDT1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_560317#GO:0005622;GO:0008408;GO:0003676#2F0P1C
- sp|E5GBP0_CUCME#3'-5' exonuclease#Cucumis melo subsp melo#unknown#GO:0005622;GO:0008408;GO:0003676#2F0P1C
- Repeat List (scaffold1089)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2550.1 |
23 |
233 |
238 |
44.11 |
211 |
48 |
2e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HDT1_POPTR |
3 |
214 |
215 |
98.6 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2550.1 |
47 |
231 |
238 |
36.13 |
185 |
45 |
8e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os01t0660800-01 |
17 |
196 |
200 |
90 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1089 |
Augustus |
mRNA |
60239 |
62426 |
. |
- |
. |
ID=Dca2550.1;Parent=Dca2550 |
| scaffold1089 |
Augustus |
exon |
60239 |
60647 |
. |
- |
. |
ID=Dca2550.1.exon1;Parent=Dca2550.1 |
| scaffold1089 |
Augustus |
exon |
62119 |
62426 |
. |
- |
. |
ID=Dca2550.1.exon2;Parent=Dca2550.1 |
