Carnation DB

Dca25580.1

Annotation

7-exons
f-1
sp|A5ARV9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_010143#GO:0003676;GO:0008270;GO:0015074#2F1P0C
sp|O22175_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g23330#GO:0003676;GO:0015074#1F1P0C
Repeat List (scaffold2538)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25580.1	148	745	952	28.99	598	46	2e-133
Target_name	Start	End	Length	Cov(%)
sp\|A5ARV9_VITVI	648	1216	1523	37.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25580.1	731	952	952	15.44	222	65	3e-84
Target_name	Start	End	Length	Cov(%)
AT3G18080.1	282	510	512	44.72

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2538	Augustus	mRNA	26399	33458	.	+	.	ID=Dca25580.1;Parent=Dca25580
scaffold2538	Augustus	exon	26399	26618	.	+	.	ID=Dca25580.1.exon1;Parent=Dca25580.1
scaffold2538	Augustus	exon	28366	28600	.	+	.	ID=Dca25580.1.exon2;Parent=Dca25580.1
scaffold2538	Augustus	exon	28672	30447	.	+	.	ID=Dca25580.1.exon3;Parent=Dca25580.1
scaffold2538	Augustus	exon	32133	32353	.	+	.	ID=Dca25580.1.exon4;Parent=Dca25580.1
scaffold2538	Augustus	exon	32478	32509	.	+	.	ID=Dca25580.1.exon5;Parent=Dca25580.1
scaffold2538	Augustus	exon	32763	32865	.	+	.	ID=Dca25580.1.exon6;Parent=Dca25580.1
scaffold2538	Augustus	exon	33187	33458	.	+	.	ID=Dca25580.1.exon7;Parent=Dca25580.1