Carnation DB

Dca2561.1

Annotation

8-exons
f-1
sp|G7KUA6_MEDTR#U11/U12 small nuclear ribonucleoprotein 35 kDa protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_7g082150#GO:0030529;GO:0003676;GO:0000166#2F0P1C
Repeat List (scaffold10897)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2561.1	6	319	322	62.73	314	62	1e-108
Target_name	Start	End	Length	Cov(%)
sp\|G7KUA6_MEDTR	1	316	566	55.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2561.1	16	233	322	54.96	218	82	4e-105
Target_name	Start	End	Length	Cov(%)
Os09t0513700-02	13	230	376	57.97

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10897	Augustus	mRNA	677	4719	.	+	.	ID=Dca2561.1;Parent=Dca2561
scaffold10897	Augustus	exon	677	836	.	+	.	ID=Dca2561.1.exon1;Parent=Dca2561.1
scaffold10897	Augustus	exon	934	1031	.	+	.	ID=Dca2561.1.exon2;Parent=Dca2561.1
scaffold10897	Augustus	exon	1149	1200	.	+	.	ID=Dca2561.1.exon3;Parent=Dca2561.1
scaffold10897	Augustus	exon	2177	2247	.	+	.	ID=Dca2561.1.exon4;Parent=Dca2561.1
scaffold10897	Augustus	exon	2834	2924	.	+	.	ID=Dca2561.1.exon5;Parent=Dca2561.1
scaffold10897	Augustus	exon	3008	3083	.	+	.	ID=Dca2561.1.exon6;Parent=Dca2561.1
scaffold10897	Augustus	exon	3607	3685	.	+	.	ID=Dca2561.1.exon7;Parent=Dca2561.1
scaffold10897	Augustus	exon	4378	4719	.	+	.	ID=Dca2561.1.exon8;Parent=Dca2561.1