Dca25621.1
Annotation
- 2-exons
- f-1
- sp|Q2R138_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g40470#GO:0005634;GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P1C
- Repeat List (scaffold2542)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25621.1 |
1 |
255 |
275 |
62.18 |
255 |
64 |
7e-90
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2R138_ORYSJ |
1038 |
1305 |
1747 |
15.34 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25621.1 |
1 |
202 |
275 |
30.18 |
202 |
39 |
2e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
782 |
996 |
1539 |
13.97 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2542 |
Augustus |
mRNA |
341 |
1230 |
. |
+ |
. |
ID=Dca25621.1;Parent=Dca25621 |
| scaffold2542 |
Augustus |
exon |
341 |
703 |
. |
+ |
. |
ID=Dca25621.1.exon1;Parent=Dca25621.1 |
| scaffold2542 |
Augustus |
exon |
766 |
1230 |
. |
+ |
. |
ID=Dca25621.1.exon2;Parent=Dca25621.1 |
