Dca2601.1
Annotation
- 3-exons
- f-1
- sp|F6HXC9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0002g06810#GO:0005488#1F0P0C
- Os06t0606700-00 Tetratricopeptide-like helical domain containing protein.
- Repeat List (scaffold109)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2601.1 |
242 |
345 |
351 |
19.08 |
104 |
65 |
2e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HXC9_VITVI |
163 |
266 |
306 |
33.98 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2601.1 |
250 |
351 |
351 |
16.8 |
102 |
58 |
2e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0606700-00 |
152 |
253 |
279 |
36.55 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold109 |
Augustus |
mRNA |
280781 |
282164 |
. |
+ |
. |
ID=Dca2601.1;Parent=Dca2601 |
| scaffold109 |
Augustus |
exon |
280781 |
281608 |
. |
+ |
. |
ID=Dca2601.1.exon1;Parent=Dca2601.1 |
| scaffold109 |
Augustus |
exon |
281739 |
281911 |
. |
+ |
. |
ID=Dca2601.1.exon2;Parent=Dca2601.1 |
| scaffold109 |
Augustus |
exon |
282110 |
282164 |
. |
+ |
. |
ID=Dca2601.1.exon3;Parent=Dca2601.1 |
