Carnation DB

Dca26220.1

Annotation

5-exons
f-1
sp|E2J5C4_RUBCO#Peroxidase 7#Rubia cordifolia (Indian madder)#unknown#GO:0020037;GO:0004601;GO:0006979#2F1P0C
Repeat List (scaffold2600)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26220.1	1	74	398	13.56	74	73	3e-27
Target_name	Start	End	Length	Cov(%)
sp\|E2J5C4_RUBCO	75	148	354	20.9

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26220.1	1	82	398	14.57	82	70	6e-28
Target_name	Start	End	Length	Cov(%)
AT1G71695.1	81	164	358	23.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2600	Augus-PASA	mRNA	6044	11945	.	+	.	ID=Dca26220.1;Parent=Dca26220
scaffold2600	Augus-PASA	exon	6044	6070	.	+	.	ID=Dca26220.1.exon1;Parent=Dca26220.1
scaffold2600	Augus-PASA	exon	6729	6923	.	+	.	ID=Dca26220.1.exon2;Parent=Dca26220.1
scaffold2600	Augus-PASA	exon	9316	9510	.	+	.	ID=Dca26220.1.exon3;Parent=Dca26220.1
scaffold2600	Augustus	exon	10472	10627	.	+	.	ID=Dca26220.1.exon4;Parent=Dca26220.1
scaffold2600	Augus-PASA	exon	11322	11945	.	+	.	ID=Dca26220.1.exon5;Parent=Dca26220.1