Carnation DB

Dca26307.1

Annotation

6-exons
f-1
sp|D7SYH9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0077g00590#GO:0005840;GO:0019843;GO:0003735;GO:0006412#2F1P1C
AT3G17170.1 | Symbols: RFC3 | Translation elongation factor EF1B/ribosomal protein S6 family protein | chr3:5853186-5854853 REVERSE LENGTH=314
Repeat List (scaffold261)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26307.1	61	185	186	36.02	125	43	2e-27
Target_name	Start	End	Length	Cov(%)
sp\|D7SYH9_VITVI	57	215	301	52.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26307.1	90	185	186	32.25	96	50	2e-27
Target_name	Start	End	Length	Cov(%)
AT3G17170.1	87	208	314	38.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold261	Augustus	mRNA	107106	110279	.	-	.	ID=Dca26307.1;Parent=Dca26307
scaffold261	Augustus	exon	107106	107299	.	-	.	ID=Dca26307.1.exon1;Parent=Dca26307.1
scaffold261	Augustus	exon	108107	108163	.	-	.	ID=Dca26307.1.exon2;Parent=Dca26307.1
scaffold261	Augustus	exon	108266	108308	.	-	.	ID=Dca26307.1.exon3;Parent=Dca26307.1
scaffold261	Augustus	exon	108625	108675	.	-	.	ID=Dca26307.1.exon4;Parent=Dca26307.1
scaffold261	Augustus	exon	109787	109875	.	-	.	ID=Dca26307.1.exon5;Parent=Dca26307.1
scaffold261	Augustus	exon	110153	110279	.	-	.	ID=Dca26307.1.exon6;Parent=Dca26307.1