Carnation DB

Dca26452.1

Annotation

5-exons
f-1
sp|B9RKC1_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1048170#unknown#0F0P0C
AT2G19710.1 | Symbols: | Regulator of Vps4 activity in the MVB pathway protein | chr2:8506339-8509817 FORWARD LENGTH=937
Repeat List (scaffold2625)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26452.1	1	179	226	59.73	179	76	4e-77
Target_name	Start	End	Length	Cov(%)
sp\|B9RKC1_RICCO	1	179	1155	15.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26452.1	1	194	226	51.32	194	60	7e-70
Target_name	Start	End	Length	Cov(%)
Os01t0706400-01	11	204	1102	17.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2625	Augustus	mRNA	12735	15053	.	-	.	ID=Dca26452.1;Parent=Dca26452
scaffold2625	Augustus	exon	12735	12974	.	-	.	ID=Dca26452.1.exon1;Parent=Dca26452.1
scaffold2625	Augustus	exon	13115	13286	.	-	.	ID=Dca26452.1.exon2;Parent=Dca26452.1
scaffold2625	Augustus	exon	13899	14002	.	-	.	ID=Dca26452.1.exon3;Parent=Dca26452.1
scaffold2625	Augustus	exon	14742	14874	.	-	.	ID=Dca26452.1.exon4;Parent=Dca26452.1
scaffold2625	Augustus	exon	15022	15053	.	-	.	ID=Dca26452.1.exon5;Parent=Dca26452.1