Carnation DB

Dca2680.1

Annotation

7-exons
f-1
sp|A5ART6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_028058#GO:0003676;GO:0015074#1F1P0C
sp|Q9SIM3_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g20460#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold1094)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2680.1	1	473	710	31.54	473	40	2e-104
Target_name	Start	End	Length	Cov(%)
sp\|A5ART6_VITVI	472	1033	1125	49.95

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2680.1	114	470	710	23.38	357	40	5e-83
Target_name	Start	End	Length	Cov(%)
AT4G23160.1	83	506	1262	33.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1094	Augustus	mRNA	33058	41683	.	-	.	ID=Dca2680.1;Parent=Dca2680
scaffold1094	Augustus	exon	33058	33595	.	-	.	ID=Dca2680.1.exon1;Parent=Dca2680.1
scaffold1094	Augustus	exon	35930	35996	.	-	.	ID=Dca2680.1.exon2;Parent=Dca2680.1
scaffold1094	Augustus	exon	39572	39690	.	-	.	ID=Dca2680.1.exon3;Parent=Dca2680.1
scaffold1094	Augustus	exon	39825	40076	.	-	.	ID=Dca2680.1.exon4;Parent=Dca2680.1
scaffold1094	Augustus	exon	40148	40651	.	-	.	ID=Dca2680.1.exon5;Parent=Dca2680.1
scaffold1094	Augustus	exon	40748	41111	.	-	.	ID=Dca2680.1.exon6;Parent=Dca2680.1
scaffold1094	Augustus	exon	41395	41683	.	-	.	ID=Dca2680.1.exon7;Parent=Dca2680.1