Carnation DB

Dca26921.1

Annotation

5-exons
f-1
sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold2678)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26921.1	16	102	1220	2.37	87	33	3e-07
Target_name	Start	End	Length	Cov(%)
sp\|G9FIF2_BETVU	15	102	1553	5.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26921.1	376	1193	1220	25.73	818	37	1e-155
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	551	1387	1539	54.38

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2678	Augustus	mRNA	14955	21172	.	-	.	ID=Dca26921.1;Parent=Dca26921
scaffold2678	Augustus	exon	14955	15759	.	-	.	ID=Dca26921.1.exon1;Parent=Dca26921.1
scaffold2678	Augustus	exon	15925	17676	.	-	.	ID=Dca26921.1.exon2;Parent=Dca26921.1
scaffold2678	Augustus	exon	18261	18443	.	-	.	ID=Dca26921.1.exon3;Parent=Dca26921.1
scaffold2678	Augustus	exon	20018	20611	.	-	.	ID=Dca26921.1.exon4;Parent=Dca26921.1
scaffold2678	Augustus	exon	20844	21172	.	-	.	ID=Dca26921.1.exon5;Parent=Dca26921.1