Carnation DB

Dca2699.1

Annotation

6-exons
f-1
sp|F6HU88_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0025g02820#unknown#0F0P0C
sp|B9RYW5_RICCO#Phosphatidylcholine transfer protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1314180#unknown#0F0P0C
Repeat List (scaffold1095)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2699.1	20	375	375	63.46	356	66	3e-138
Target_name	Start	End	Length	Cov(%)
sp\|F6HU88_VITVI	81	438	438	81.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2699.1	64	375	375	57.33	312	69	2e-127
Target_name	Start	End	Length	Cov(%)
AT1G64720.1	80	385	385	79.48

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1095	Augus-PASA	mRNA	33001	35353	.	-	.	ID=Dca2699.1;Parent=Dca2699
scaffold1095	Augus-PASA	exon	33001	33446	.	-	.	ID=Dca2699.1.exon1;Parent=Dca2699.1
scaffold1095	Augus-PASA	exon	33582	33660	.	-	.	ID=Dca2699.1.exon2;Parent=Dca2699.1
scaffold1095	Augus-PASA	exon	33838	33921	.	-	.	ID=Dca2699.1.exon3;Parent=Dca2699.1
scaffold1095	Augus-PASA	exon	34012	34188	.	-	.	ID=Dca2699.1.exon4;Parent=Dca2699.1
scaffold1095	Augus-PASA	exon	34518	34680	.	-	.	ID=Dca2699.1.exon5;Parent=Dca2699.1
scaffold1095	Augus-PASA	exon	35175	35353	.	-	.	ID=Dca2699.1.exon6;Parent=Dca2699.1