Carnation DB

Dca27156.1

Annotation

6-exons
f-1
sp|E0CQ76_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g14460#unknown#0F0P0C
Os04t0250700-01 Uncharacterised protein family UPF0307 domain containing protein.
Repeat List (scaffold27)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27156.1	42	274	282	47.87	233	57	1e-61
Target_name	Start	End	Length	Cov(%)
sp\|E0CQ76_VITVI	59	292	295	79.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27156.1	28	272	282	42.19	245	48	3e-53
Target_name	Start	End	Length	Cov(%)
Os04t0250700-01	22	270	277	89.89

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold27	Augus-PASA	mRNA	422416	424775	.	-	.	ID=Dca27156.1;Parent=Dca27156
scaffold27	Augus-PASA	exon	422416	422583	.	-	.	ID=Dca27156.1.exon1;Parent=Dca27156.1
scaffold27	Augus-PASA	exon	423389	423502	.	-	.	ID=Dca27156.1.exon2;Parent=Dca27156.1
scaffold27	Augus-PASA	exon	423949	424106	.	-	.	ID=Dca27156.1.exon3;Parent=Dca27156.1
scaffold27	Augus-PASA	exon	424189	424240	.	-	.	ID=Dca27156.1.exon4;Parent=Dca27156.1
scaffold27	Augus-PASA	exon	424319	424367	.	-	.	ID=Dca27156.1.exon5;Parent=Dca27156.1
scaffold27	Augus-PASA	exon	424468	424775	.	-	.	ID=Dca27156.1.exon6;Parent=Dca27156.1