Dca27166.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q2AA09_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=20.t00008#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold270)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27166.1 |
164 |
372 |
372 |
20.43 |
209 |
37 |
3e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
43 |
250 |
1717 |
12.11 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27166.1 |
1 |
69 |
372 |
6.72 |
69 |
37 |
1e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
123 |
190 |
192 |
35.41 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold270 |
Augustus |
mRNA |
21209 |
23789 |
. |
+ |
. |
ID=Dca27166.1;Parent=Dca27166 |
| scaffold270 |
Augustus |
exon |
21209 |
21515 |
. |
+ |
. |
ID=Dca27166.1.exon1;Parent=Dca27166.1 |
| scaffold270 |
Augustus |
exon |
21621 |
21802 |
. |
+ |
. |
ID=Dca27166.1.exon2;Parent=Dca27166.1 |
| scaffold270 |
Augustus |
exon |
23160 |
23789 |
. |
+ |
. |
ID=Dca27166.1.exon3;Parent=Dca27166.1 |
