Carnation DB

Dca27173.1

Annotation

5-exons
f-1
sp|E0CTM3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0028g02620#unknown#0F0P0C
AT2G42390.1 | Symbols: | protein kinase C substrate, heavy chain-related | chr2:17651381-17652509 REVERSE LENGTH=212
Repeat List (scaffold270)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27173.1	6	176	197	50.76	171	58	1e-53
Target_name	Start	End	Length	Cov(%)
sp\|E0CTM3_VITVI	5	177	205	84.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27173.1	17	180	197	49.23	164	57	6e-54
Target_name	Start	End	Length	Cov(%)
AT2G42390.1	15	183	212	79.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold270	Augus-PASA	mRNA	92121	95652	.	+	.	ID=Dca27173.1;Parent=Dca27173
scaffold270	Augus-PASA	exon	92121	92226	.	+	.	ID=Dca27173.1.exon1;Parent=Dca27173.1
scaffold270	Augus-PASA	exon	92348	92461	.	+	.	ID=Dca27173.1.exon2;Parent=Dca27173.1
scaffold270	Augus-PASA	exon	94638	94733	.	+	.	ID=Dca27173.1.exon3;Parent=Dca27173.1
scaffold270	Augus-PASA	exon	94922	95095	.	+	.	ID=Dca27173.1.exon4;Parent=Dca27173.1
scaffold270	Augus-PASA	exon	95549	95652	.	+	.	ID=Dca27173.1.exon5;Parent=Dca27173.1