Carnation DB

Dca27180.1

Annotation

7-exons
f-1
sp|A9PEC9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_729432#GO:0005783;GO:0005509;GO:0051082;GO:0006457#2F1P1C
Os08t0560800-00 Similar to Calreticulin-like protein (Fragment).
Repeat List (scaffold270)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27180.1	51	100	187	16.57	50	49	2e-07
Target_name	Start	End	Length	Cov(%)
sp\|A9PEC9_POPTR	316	379	414	15.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27180.1	49	93	187	16.04	45	51	1e-07
Target_name	Start	End	Length	Cov(%)
Os03t0832200-01	319	377	443	13.31

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold270	Augustus	mRNA	142209	143701	.	+	.	ID=Dca27180.1;Parent=Dca27180
scaffold270	Augustus	exon	142209	142379	.	+	.	ID=Dca27180.1.exon1;Parent=Dca27180.1
scaffold270	Augustus	exon	142505	142558	.	+	.	ID=Dca27180.1.exon2;Parent=Dca27180.1
scaffold270	Augustus	exon	142706	142753	.	+	.	ID=Dca27180.1.exon3;Parent=Dca27180.1
scaffold270	Augustus	exon	142947	142976	.	+	.	ID=Dca27180.1.exon4;Parent=Dca27180.1
scaffold270	Augustus	exon	143064	143184	.	+	.	ID=Dca27180.1.exon5;Parent=Dca27180.1
scaffold270	Augustus	exon	143463	143584	.	+	.	ID=Dca27180.1.exon6;Parent=Dca27180.1
scaffold270	Augustus	exon	143684	143701	.	+	.	ID=Dca27180.1.exon7;Parent=Dca27180.1