Carnation DB

Dca27339.1

Annotation

5-exons
f-1
sp|F6HET1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0090g01120#unknown#0F0P0C
sp|D7LAY2_ARALL#Extracellular ligand-gated ion channel#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_479553#unknown#0F0P0C
Repeat List (scaffold272)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27339.1	33	468	468	61.75	436	66	9e-163
Target_name	Start	End	Length	Cov(%)
sp\|F6HET1_VITVI	1	435	435	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27339.1	17	468	468	61.11	452	63	4e-162
Target_name	Start	End	Length	Cov(%)
AT3G20300.1	3	452	452	99.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold272	Augustus	mRNA	54459	56422	.	+	.	ID=Dca27339.1;Parent=Dca27339
scaffold272	Augustus	exon	54459	54523	.	+	.	ID=Dca27339.1.exon1;Parent=Dca27339.1
scaffold272	Augustus	exon	54599	55052	.	+	.	ID=Dca27339.1.exon2;Parent=Dca27339.1
scaffold272	Augustus	exon	55151	55600	.	+	.	ID=Dca27339.1.exon3;Parent=Dca27339.1
scaffold272	Augustus	exon	55896	56196	.	+	.	ID=Dca27339.1.exon4;Parent=Dca27339.1
scaffold272	Augustus	exon	56286	56422	.	+	.	ID=Dca27339.1.exon5;Parent=Dca27339.1