Dca27341.1
Annotation
- 4-exons
- f-1
- sp|B9HP85_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_557974#GO:0000166;GO:0003723;GO:0008270#3F0P0C
- AT1G07360.1 | Symbols: | CCCH-type zinc fingerfamily protein with RNA-binding domain | chr1:2260562-2262795 REVERSE LENGTH=481
- Repeat List (scaffold272)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27341.1 |
1 |
459 |
479 |
75.78 |
459 |
76 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HP85_POPTR |
1 |
473 |
531 |
89.07 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27341.1 |
1 |
438 |
479 |
68.05 |
438 |
75 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G07360.1 |
1 |
418 |
481 |
86.9 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold272 |
Augus-PASA |
mRNA |
69698 |
74086 |
. |
- |
. |
ID=Dca27341.1;Parent=Dca27341 |
| scaffold272 |
Augus-PASA |
exon |
69698 |
70538 |
. |
- |
. |
ID=Dca27341.1.exon1;Parent=Dca27341.1 |
| scaffold272 |
Augus-PASA |
exon |
71082 |
71305 |
. |
- |
. |
ID=Dca27341.1.exon2;Parent=Dca27341.1 |
| scaffold272 |
Augus-PASA |
exon |
72386 |
72655 |
. |
- |
. |
ID=Dca27341.1.exon3;Parent=Dca27341.1 |
| scaffold272 |
Augustus |
exon |
73982 |
74086 |
. |
- |
. |
ID=Dca27341.1.exon4;Parent=Dca27341.1 |
