Carnation DB

Dca27342.1

Annotation

6-exons
f-1
sp|G5DWR5_SILLA#Chloroplast stem-loop binding protein#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0003824;GO:0050662;GO:0000166;GO:0044237#3F1P0C
Repeat List (scaffold272)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27342.1	58	410	411	75.42	353	88	0
Target_name	Start	End	Length	Cov(%)
sp\|G5DWR5_SILLA	36	384	384	90.88

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27342.1	74	411	411	67.88	338	83	1e-169
Target_name	Start	End	Length	Cov(%)
AT3G63140.1	69	406	406	83.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold272	Augus-PASA	mRNA	80064	82679	.	+	.	ID=Dca27342.1;Parent=Dca27342
scaffold272	Augus-PASA	exon	80064	80474	.	+	.	ID=Dca27342.1.exon1;Parent=Dca27342.1
scaffold272	Augus-PASA	exon	80852	80973	.	+	.	ID=Dca27342.1.exon2;Parent=Dca27342.1
scaffold272	Augus-PASA	exon	81583	81685	.	+	.	ID=Dca27342.1.exon3;Parent=Dca27342.1
scaffold272	Augus-PASA	exon	81798	81936	.	+	.	ID=Dca27342.1.exon4;Parent=Dca27342.1
scaffold272	Augustus	exon	82051	82328	.	+	.	ID=Dca27342.1.exon5;Parent=Dca27342.1
scaffold272	Augustus	exon	82497	82679	.	+	.	ID=Dca27342.1.exon6;Parent=Dca27342.1