Carnation DB

Dca27343.1

Annotation

6-exons
f-1
sp|F6HET5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0090g01240#unknown#0F0P0C
AT4G26750.1 | Symbols: | hydroxyproline-rich glycoprotein family protein | chr4:13475848-13478382 REVERSE LENGTH=421
Repeat List (scaffold272)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27343.1	2	403	403	65.75	402	61	5e-129
Target_name	Start	End	Length	Cov(%)
sp\|F6HET5_VITVI	3	426	426	99.53

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27343.1	4	402	403	60.79	399	58	3e-107
Target_name	Start	End	Length	Cov(%)
AT4G26750.1	5	418	421	98.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold272	Augus-PASA	mRNA	86904	93372	.	+	.	ID=Dca27343.1;Parent=Dca27343
scaffold272	Augus-PASA	exon	86904	86994	.	+	.	ID=Dca27343.1.exon1;Parent=Dca27343.1
scaffold272	Augus-PASA	exon	87105	87205	.	+	.	ID=Dca27343.1.exon2;Parent=Dca27343.1
scaffold272	Augus-PASA	exon	89028	89137	.	+	.	ID=Dca27343.1.exon3;Parent=Dca27343.1
scaffold272	Augus-PASA	exon	90150	90225	.	+	.	ID=Dca27343.1.exon4;Parent=Dca27343.1
scaffold272	Augus-PASA	exon	90350	90490	.	+	.	ID=Dca27343.1.exon5;Parent=Dca27343.1
scaffold272	Augus-PASA	exon	92680	93372	.	+	.	ID=Dca27343.1.exon6;Parent=Dca27343.1