Dca27360.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold27207)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27360.1 |
1 |
304 |
312 |
44.87 |
304 |
46 |
1e-72
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
254 |
535 |
964 |
29.25 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27360.1 |
2 |
306 |
312 |
34.29 |
305 |
32 |
3e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
652 |
981 |
1401 |
23.55 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold27207 |
Augustus |
mRNA |
10 |
1030 |
. |
+ |
. |
ID=Dca27360.1;Parent=Dca27360 |
| scaffold27207 |
Augustus |
exon |
10 |
668 |
. |
+ |
. |
ID=Dca27360.1.exon1;Parent=Dca27360.1 |
| scaffold27207 |
Augustus |
exon |
751 |
1030 |
. |
+ |
. |
ID=Dca27360.1.exon2;Parent=Dca27360.1 |
