Carnation DB

Dca27393.1

Annotation

5-exons
f-1
sp|F4NCJ0_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Os06t0484800-00 Reverse transcriptase domain containing protein.
Repeat List (scaffold2726)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27393.1	241	1437	1457	34.04	1197	38	0
Target_name	Start	End	Length	Cov(%)
sp\|F4NCJ0_BETVU	28	1324	1355	95.71

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27393.1	345	1054	1457	15.78	710	30	3e-105
Target_name	Start	End	Length	Cov(%)
Os06t0484800-00	96	852	857	88.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2726	Augustus	mRNA	31261	36057	.	+	.	ID=Dca27393.1;Parent=Dca27393
scaffold2726	Augustus	exon	31261	31977	.	+	.	ID=Dca27393.1.exon1;Parent=Dca27393.1
scaffold2726	Augustus	exon	32079	32327	.	+	.	ID=Dca27393.1.exon2;Parent=Dca27393.1
scaffold2726	Augustus	exon	32433	32929	.	+	.	ID=Dca27393.1.exon3;Parent=Dca27393.1
scaffold2726	Augustus	exon	33082	35585	.	+	.	ID=Dca27393.1.exon4;Parent=Dca27393.1
scaffold2726	Augustus	exon	35651	36057	.	+	.	ID=Dca27393.1.exon5;Parent=Dca27393.1