Carnation DB

Dca2741.1

Annotation

6-exons
f-1
sp|B9H4K8_POPTR#DNA topoisomerase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_861019#GO:0005694;GO:0003917;GO:0008270;GO:0006265#2F1P1C
Repeat List (scaffold1097)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2741.1	139	239	296	18.24	101	53	3e-24
Target_name	Start	End	Length	Cov(%)
sp\|B9H4K8_POPTR	741	841	910	11.09

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2741.1	137	239	296	17.22	103	49	2e-21
Target_name	Start	End	Length	Cov(%)
AT5G63920.1	745	849	926	11.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1097	Augustus	mRNA	89684	92540	.	+	.	ID=Dca2741.1;Parent=Dca2741
scaffold1097	Augustus	exon	89684	89822	.	+	.	ID=Dca2741.1.exon1;Parent=Dca2741.1
scaffold1097	Augustus	exon	90911	91211	.	+	.	ID=Dca2741.1.exon2;Parent=Dca2741.1
scaffold1097	Augustus	exon	91282	91412	.	+	.	ID=Dca2741.1.exon3;Parent=Dca2741.1
scaffold1097	Augustus	exon	91632	91749	.	+	.	ID=Dca2741.1.exon4;Parent=Dca2741.1
scaffold1097	Augustus	exon	92220	92392	.	+	.	ID=Dca2741.1.exon5;Parent=Dca2741.1
scaffold1097	Augustus	exon	92512	92540	.	+	.	ID=Dca2741.1.exon6;Parent=Dca2741.1