Carnation DB

Dca27427.1

Annotation

5-exons
f-1
sp|F6H6H6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0050g02240#unknown#0F0P0C
Os06t0264800-01 Similar to Threonine endopeptidase.
Repeat List (scaffold273)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27427.1	3	166	166	67.46	164	69	3e-54
Target_name	Start	End	Length	Cov(%)
sp\|F6H6H6_VITVI	2	161	161	99.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27427.1	7	166	166	64.45	160	65	4e-49
Target_name	Start	End	Length	Cov(%)
AT4G01150.1	5	164	164	97.56

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold273	Augus-PASA	mRNA	23496	25383	.	-	.	ID=Dca27427.1;Parent=Dca27427
scaffold273	Augus-PASA	exon	23496	23561	.	-	.	ID=Dca27427.1.exon1;Parent=Dca27427.1
scaffold273	Augus-PASA	exon	23782	23853	.	-	.	ID=Dca27427.1.exon2;Parent=Dca27427.1
scaffold273	Augus-PASA	exon	24010	24117	.	-	.	ID=Dca27427.1.exon3;Parent=Dca27427.1
scaffold273	Augus-PASA	exon	24220	24320	.	-	.	ID=Dca27427.1.exon4;Parent=Dca27427.1
scaffold273	Augus-PASA	exon	25230	25383	.	-	.	ID=Dca27427.1.exon5;Parent=Dca27427.1