Dca27471.1
Annotation
- 2-exons
- f-1
- sp|B9HT29_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_227220#GO:0008270#1F0P0C
- AT5G05830.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr5:1755910-1756825 FORWARD LENGTH=204
- Repeat List (scaffold2733)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27471.1 |
97 |
231 |
231 |
41.99 |
135 |
72 |
1e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HT29_POPTR |
37 |
171 |
171 |
78.94 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27471.1 |
100 |
231 |
231 |
39.39 |
132 |
68 |
2e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G05830.1 |
70 |
203 |
204 |
65.68 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2733 |
Augustus |
mRNA |
8174 |
11237 |
. |
+ |
. |
ID=Dca27471.1;Parent=Dca27471 |
| scaffold2733 |
Augustus |
exon |
8174 |
8637 |
. |
+ |
. |
ID=Dca27471.1.exon1;Parent=Dca27471.1 |
| scaffold2733 |
Augustus |
exon |
11006 |
11237 |
. |
+ |
. |
ID=Dca27471.1.exon2;Parent=Dca27471.1 |
