Dca27549.1
Annotation
- 4-exons
- f-1
- sp|D7L721_ARALL#Exopolygalacturonase#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_478122#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
- Repeat List (scaffold2744)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27549.1 |
14 |
360 |
366 |
56.55 |
347 |
60 |
9e-117
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7L721_ARALL |
97 |
441 |
449 |
76.83 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27549.1 |
25 |
360 |
366 |
54.64 |
336 |
60 |
1e-114
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G14040.1 |
102 |
437 |
445 |
75.5 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2744 |
Augustus |
mRNA |
9720 |
12464 |
. |
- |
. |
ID=Dca27549.1;Parent=Dca27549 |
| scaffold2744 |
Augustus |
exon |
9720 |
9956 |
. |
- |
. |
ID=Dca27549.1.exon1;Parent=Dca27549.1 |
| scaffold2744 |
Augustus |
exon |
10144 |
10659 |
. |
- |
. |
ID=Dca27549.1.exon2;Parent=Dca27549.1 |
| scaffold2744 |
Augustus |
exon |
10759 |
11079 |
. |
- |
. |
ID=Dca27549.1.exon3;Parent=Dca27549.1 |
| scaffold2744 |
Augustus |
exon |
12438 |
12464 |
. |
- |
. |
ID=Dca27549.1.exon4;Parent=Dca27549.1 |
