Carnation DB

Dca27560.1

Annotation

6-exons
f-1
sp|B9I987_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_824081#unknown#0F0P0C
AT1G02330.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756); Has 1239 Blast hits to 998 proteins in 204 species: Archae - 4; Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87; Viruses - 5; Other Eukaryotes - 542 (source: NCBI BLink). | chr1:462202-463521 REVERSE LENGTH=279
Repeat List (scaffold2745)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27560.1	3	267	267	69.66	265	70	3e-100
Target_name	Start	End	Length	Cov(%)
sp\|B9I987_POPTR	6	271	271	98.15

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27560.1	1	267	267	64.79	267	62	2e-84
Target_name	Start	End	Length	Cov(%)
AT1G02330.1	1	279	279	100

seqname	source	feature	start	end	score	strand	frame	group
scaffold2745	Augustus	mRNA	9221	14575	.	-	.	ID=Dca27560.1;Parent=Dca27560
scaffold2745	Augustus	exon	9221	9384	.	-	.	ID=Dca27560.1.exon1;Parent=Dca27560.1
scaffold2745	Augustus	exon	9630	9787	.	-	.	ID=Dca27560.1.exon2;Parent=Dca27560.1
scaffold2745	Augus-PASA	exon	9893	9966	.	-	.	ID=Dca27560.1.exon3;Parent=Dca27560.1
scaffold2745	Augus-PASA	exon	13719	13842	.	-	.	ID=Dca27560.1.exon4;Parent=Dca27560.1
scaffold2745	Augus-PASA	exon	14162	14365	.	-	.	ID=Dca27560.1.exon5;Parent=Dca27560.1
scaffold2745	Augustus	exon	14496	14575	.	-	.	ID=Dca27560.1.exon6;Parent=Dca27560.1