Carnation DB

Dca27597.1

Annotation

6-exons
f-1
sp|F6GWN3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0023g03300#GO:0016706#1F0P0C
AT2G17970.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr2:7819116-7821276 REVERSE LENGTH=507
Repeat List (scaffold275)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27597.1	4	449	577	51.99	446	66	2e-164
Target_name	Start	End	Length	Cov(%)
sp\|F6GWN3_VITVI	30	479	530	84.9

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27597.1	1	439	577	48.87	439	62	2e-155
Target_name	Start	End	Length	Cov(%)
AT2G17970.1	1	439	507	86.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold275	Augus-PASA	mRNA	28107	31673	.	+	.	ID=Dca27597.1;Parent=Dca27597
scaffold275	Augus-PASA	exon	28107	28257	.	+	.	ID=Dca27597.1.exon1;Parent=Dca27597.1
scaffold275	Augustus	exon	29494	30087	.	+	.	ID=Dca27597.1.exon2;Parent=Dca27597.1
scaffold275	Augustus	exon	30201	30286	.	+	.	ID=Dca27597.1.exon3;Parent=Dca27597.1
scaffold275	Augus-PASA	exon	30491	30801	.	+	.	ID=Dca27597.1.exon4;Parent=Dca27597.1
scaffold275	Augus-PASA	exon	30956	31027	.	+	.	ID=Dca27597.1.exon5;Parent=Dca27597.1
scaffold275	Augus-PASA	exon	31154	31673	.	+	.	ID=Dca27597.1.exon6;Parent=Dca27597.1