Dca27628.1
Annotation
- 4-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2752)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27628.1 |
30 |
879 |
883 |
54.58 |
850 |
51 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
32 |
987 |
1501 |
63.69 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27628.1 |
287 |
862 |
883 |
25.36 |
576 |
37 |
3e-101
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
414 |
996 |
1539 |
37.88 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2752 |
Augustus |
mRNA |
9638 |
12568 |
. |
- |
. |
ID=Dca27628.1;Parent=Dca27628 |
| scaffold2752 |
Augustus |
exon |
9638 |
10410 |
. |
- |
. |
ID=Dca27628.1.exon1;Parent=Dca27628.1 |
| scaffold2752 |
Augustus |
exon |
10513 |
11658 |
. |
- |
. |
ID=Dca27628.1.exon2;Parent=Dca27628.1 |
| scaffold2752 |
Augustus |
exon |
11752 |
11920 |
. |
- |
. |
ID=Dca27628.1.exon3;Parent=Dca27628.1 |
| scaffold2752 |
Augustus |
exon |
12005 |
12568 |
. |
- |
. |
ID=Dca27628.1.exon4;Parent=Dca27628.1 |
