Dca27789.1
Annotation
- 4-exons
- f-1
- sp|B9HVN9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_769424#unknown#0F0P0C
- sp|B9S7B3_RICCO#Pentatricopeptide repeat-containing protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0775780#unknown#0F0P0C
- Repeat List (scaffold277)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27789.1 |
45 |
383 |
390 |
55.12 |
339 |
62 |
1e-127
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HVN9_POPTR |
47 |
397 |
404 |
86.88 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27789.1 |
52 |
389 |
390 |
52.3 |
338 |
60 |
2e-116
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G14590.1 |
45 |
384 |
386 |
88.08 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold277 |
Augustus |
mRNA |
15943 |
18973 |
. |
+ |
. |
ID=Dca27789.1;Parent=Dca27789 |
| scaffold277 |
Augustus |
exon |
15943 |
16203 |
. |
+ |
. |
ID=Dca27789.1.exon1;Parent=Dca27789.1 |
| scaffold277 |
Augustus |
exon |
17017 |
17382 |
. |
+ |
. |
ID=Dca27789.1.exon2;Parent=Dca27789.1 |
| scaffold277 |
Augustus |
exon |
18073 |
18554 |
. |
+ |
. |
ID=Dca27789.1.exon3;Parent=Dca27789.1 |
| scaffold277 |
Augustus |
exon |
18910 |
18973 |
. |
+ |
. |
ID=Dca27789.1.exon4;Parent=Dca27789.1 |
