Dca27829.1
Annotation
- 4-exons
- f-1
- sp|F6H9G7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0069g00620#GO:0016021;GO:0030288;GO:0005234;GO:0004970#2F0P2C
- sp|B9ILB8_POPTR#Glutamate receptor#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_261549#GO:0016021;GO:0030288;GO:0005234;GO:0004970#2F0P2C
- Repeat List (scaffold2772)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27829.1 |
4 |
380 |
403 |
30.76 |
377 |
33 |
1e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6H9G7_VITVI |
482 |
858 |
990 |
38.08 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27829.1 |
1 |
381 |
403 |
29.03 |
381 |
31 |
5e-50
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os09t0429500-00 |
472 |
846 |
947 |
39.59 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2772 |
Augustus |
mRNA |
36303 |
37848 |
. |
+ |
. |
ID=Dca27829.1;Parent=Dca27829 |
| scaffold2772 |
Augustus |
exon |
36303 |
36482 |
. |
+ |
. |
ID=Dca27829.1.exon1;Parent=Dca27829.1 |
| scaffold2772 |
Augustus |
exon |
36606 |
36918 |
. |
+ |
. |
ID=Dca27829.1.exon2;Parent=Dca27829.1 |
| scaffold2772 |
Augustus |
exon |
37030 |
37442 |
. |
+ |
. |
ID=Dca27829.1.exon3;Parent=Dca27829.1 |
| scaffold2772 |
Augustus |
exon |
37543 |
37848 |
. |
+ |
. |
ID=Dca27829.1.exon4;Parent=Dca27829.1 |
