Dca27857.1
Annotation
- 3-exons
- f-1
- sp|A5BDA7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_004473#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
- sp|Q9SJP0_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g15410#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2776)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27857.1 |
330 |
454 |
468 |
8.11 |
125 |
30 |
6e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BDA7_VITVI |
532 |
643 |
938 |
11.94 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27857.1 |
54 |
223 |
468 |
11.75 |
170 |
33 |
2e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
7 |
175 |
591 |
28.59 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2776 |
Augustus |
mRNA |
34106 |
36302 |
. |
+ |
. |
ID=Dca27857.1;Parent=Dca27857 |
| scaffold2776 |
Augustus |
exon |
34106 |
34789 |
. |
+ |
. |
ID=Dca27857.1.exon1;Parent=Dca27857.1 |
| scaffold2776 |
Augustus |
exon |
34968 |
35278 |
. |
+ |
. |
ID=Dca27857.1.exon2;Parent=Dca27857.1 |
| scaffold2776 |
Augustus |
exon |
35891 |
36302 |
. |
+ |
. |
ID=Dca27857.1.exon3;Parent=Dca27857.1 |
