Dca27868.1
Annotation
- 4-exons
- f-1
- sp|D7L0I4_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_478618#GO:0016787#1F0P0C
- AT3G12600.1 | Symbols: atnudt16, NUDT16 | nudix hydrolase homolog 16 | chr3:4004809-4005995 FORWARD LENGTH=180
- Repeat List (scaffold2778)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27868.1 |
1 |
175 |
175 |
70.85 |
175 |
71 |
2e-68
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7L0I4_ARALL |
1 |
176 |
180 |
97.77 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27868.1 |
1 |
175 |
175 |
69.14 |
175 |
69 |
1e-60
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G12600.1 |
1 |
176 |
180 |
97.77 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2778 |
Augustus |
mRNA |
569 |
3647 |
. |
+ |
. |
ID=Dca27868.1;Parent=Dca27868 |
| scaffold2778 |
Augustus |
exon |
569 |
639 |
. |
+ |
. |
ID=Dca27868.1.exon1;Parent=Dca27868.1 |
| scaffold2778 |
Augustus |
exon |
2382 |
2493 |
. |
+ |
. |
ID=Dca27868.1.exon2;Parent=Dca27868.1 |
| scaffold2778 |
Augus-PASA |
exon |
2948 |
3031 |
. |
+ |
. |
ID=Dca27868.1.exon3;Parent=Dca27868.1 |
| scaffold2778 |
Augus-PASA |
exon |
3387 |
3647 |
. |
+ |
. |
ID=Dca27868.1.exon4;Parent=Dca27868.1 |
