Dca27906.1
Annotation
- 2-exons
- f-1
- sp|C6JRX9_SORBI#Putative uncharacterized protein Sb0013s009070#Sorghum bicolor (Sorghum) (Sorghum vulgare)#Name=Sb0013s009070#GO:0003676;GO:0015074#1F1P0C
- sp|Q2R2I1_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g35740#unknown#0F0P0C
- Repeat List (scaffold27808)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27906.1 |
2 |
168 |
187 |
56.14 |
167 |
54 |
7e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|C6JRX9_SORBI |
264 |
459 |
1219 |
16.07 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27906.1 |
4 |
139 |
187 |
31.01 |
136 |
43 |
9e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
86 |
221 |
1262 |
10.77 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold27808 |
Augustus |
mRNA |
291 |
941 |
. |
+ |
. |
ID=Dca27906.1;Parent=Dca27906 |
| scaffold27808 |
Augustus |
exon |
291 |
716 |
. |
+ |
. |
ID=Dca27906.1.exon1;Parent=Dca27906.1 |
| scaffold27808 |
Augustus |
exon |
804 |
941 |
. |
+ |
. |
ID=Dca27906.1.exon2;Parent=Dca27906.1 |
