Carnation DB

Dca27934.1

Annotation

11-exons
f-1
sp|B9I6C6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_834438#GO:0004190;GO:0006629;GO:0006508#1F2P0C
sp|F2VJ74_TOBAC#Aspartic protease 1#Nicotiana tabacum (Common tobacco)#unknown#GO:0004190;GO:0006629;GO:0006508#1F2P0C
Repeat List (scaffold2785)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27934.1	14	420	420	68.09	407	65	1e-175
Target_name	Start	End	Length	Cov(%)
sp\|B9I6C6_POPTR	66	507	507	87.17

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27934.1	15	419	420	59.04	405	57	6e-149
Target_name	Start	End	Length	Cov(%)
AT1G62290.1	73	512	513	85.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2785	Augustus	mRNA	7347	10339	.	-	.	ID=Dca27934.1;Parent=Dca27934
scaffold2785	Augustus	exon	7347	7431	.	-	.	ID=Dca27934.1.exon1;Parent=Dca27934.1
scaffold2785	Augustus	exon	7505	7593	.	-	.	ID=Dca27934.1.exon2;Parent=Dca27934.1
scaffold2785	Augustus	exon	7689	7808	.	-	.	ID=Dca27934.1.exon3;Parent=Dca27934.1
scaffold2785	Augustus	exon	7897	8053	.	-	.	ID=Dca27934.1.exon4;Parent=Dca27934.1
scaffold2785	Augustus	exon	8205	8269	.	-	.	ID=Dca27934.1.exon5;Parent=Dca27934.1
scaffold2785	Augustus	exon	8522	8635	.	-	.	ID=Dca27934.1.exon6;Parent=Dca27934.1
scaffold2785	Augustus	exon	9336	9504	.	-	.	ID=Dca27934.1.exon7;Parent=Dca27934.1
scaffold2785	Augus-PASA	exon	9600	9712	.	-	.	ID=Dca27934.1.exon8;Parent=Dca27934.1
scaffold2785	Augus-PASA	exon	9828	9922	.	-	.	ID=Dca27934.1.exon9;Parent=Dca27934.1
scaffold2785	Augus-PASA	exon	10007	10067	.	-	.	ID=Dca27934.1.exon10;Parent=Dca27934.1
scaffold2785	Augustus	exon	10145	10339	.	-	.	ID=Dca27934.1.exon11;Parent=Dca27934.1