Dca27962.1
Annotation
- 3-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold2789)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27962.1 |
7 |
262 |
306 |
47.71 |
256 |
57 |
4e-79
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
685 |
933 |
1313 |
18.96 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27962.1 |
3 |
76 |
306 |
12.09 |
74 |
50 |
2e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
651 |
722 |
1428 |
5.04 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2789 |
Augustus |
mRNA |
63587 |
67070 |
. |
- |
. |
ID=Dca27962.1;Parent=Dca27962 |
| scaffold2789 |
Augustus |
exon |
63587 |
63724 |
. |
- |
. |
ID=Dca27962.1.exon1;Parent=Dca27962.1 |
| scaffold2789 |
Augustus |
exon |
66161 |
66748 |
. |
- |
. |
ID=Dca27962.1.exon2;Parent=Dca27962.1 |
| scaffold2789 |
Augustus |
exon |
66876 |
67070 |
. |
- |
. |
ID=Dca27962.1.exon3;Parent=Dca27962.1 |
