Dca27984.1
Annotation
- 4-exons
- f-1
- sp|Q52GZ4_SPIOL#DNA-directed RNA polymerase#Spinacia oleracea (Spinach)#Name=rpoT2#GO:0003677;GO:0003899#2F0P0C
- Repeat List (scaffold279)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27984.1 |
1 |
357 |
411 |
57.17 |
357 |
65 |
7e-132
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q52GZ4_SPIOL |
100 |
456 |
1036 |
34.45 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27984.1 |
88 |
380 |
411 |
39.65 |
293 |
56 |
7e-92
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os09t0246200-01 |
171 |
458 |
952 |
30.25 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold279 |
Augustus |
mRNA |
138329 |
139865 |
. |
- |
. |
ID=Dca27984.1;Parent=Dca27984 |
| scaffold279 |
Augustus |
exon |
138329 |
138560 |
. |
- |
. |
ID=Dca27984.1.exon1;Parent=Dca27984.1 |
| scaffold279 |
Augustus |
exon |
138656 |
138789 |
. |
- |
. |
ID=Dca27984.1.exon2;Parent=Dca27984.1 |
| scaffold279 |
Augustus |
exon |
138870 |
139094 |
. |
- |
. |
ID=Dca27984.1.exon3;Parent=Dca27984.1 |
| scaffold279 |
Augus-PASA |
exon |
139221 |
139865 |
. |
- |
. |
ID=Dca27984.1.exon4;Parent=Dca27984.1 |
