Dca28016.1
Annotation
- 3-exons
- f-1
- sp|D7TL42_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0056g01250#GO:0005634;GO:0003743;GO:0008270;GO:0045893;GO:0006352#2F2P1C
- Os05t0305100-01 Similar to Transcription factor IIIB 90 kDa subunit (TFIIIB90) (hTFIIIB90) (B- related factor 1) (BRF-1) (hBRF) (TATA box-binding protein-associated factor, RNA polymerase III, subunit 2) (TAF3B2). Splice isoform 2.
- Repeat List (scaffold2795)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28016.1 |
115 |
174 |
218 |
15.13 |
60 |
52 |
8e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7TL42_VITVI |
498 |
561 |
622 |
10.28 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28016.1 |
5 |
94 |
218 |
26.14 |
90 |
64 |
7e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os05t0305100-01 |
152 |
241 |
575 |
15.65 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2795 |
Augustus |
mRNA |
40913 |
42839 |
. |
- |
. |
ID=Dca28016.1;Parent=Dca28016 |
| scaffold2795 |
Augustus |
exon |
40913 |
41290 |
. |
- |
. |
ID=Dca28016.1.exon1;Parent=Dca28016.1 |
| scaffold2795 |
Augustus |
exon |
41798 |
42066 |
. |
- |
. |
ID=Dca28016.1.exon2;Parent=Dca28016.1 |
| scaffold2795 |
Augustus |
exon |
42830 |
42839 |
. |
- |
. |
ID=Dca28016.1.exon3;Parent=Dca28016.1 |
