Carnation DB

Dca28033.1

Annotation

6-exons
f-1
sp|F6HPM5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0026g00320#unknown#0F0P0C
AT1G23890.2 | Symbols: | NHL domain-containing protein | chr1:8438900-8440803 REVERSE LENGTH=400
Repeat List (scaffold2798)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28033.1	12	398	398	43.71	387	41	9e-74
Target_name	Start	End	Length	Cov(%)
sp\|F6HPM5_VITVI	14	438	438	97.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28033.1	11	386	398	41.7	376	43	1e-73
Target_name	Start	End	Length	Cov(%)
AT1G23890.2	12	395	400	96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2798	Augus-PASA	mRNA	14914	18689	.	-	.	ID=Dca28033.1;Parent=Dca28033
scaffold2798	Augus-PASA	exon	14914	15423	.	-	.	ID=Dca28033.1.exon1;Parent=Dca28033.1
scaffold2798	Augus-PASA	exon	15614	15711	.	-	.	ID=Dca28033.1.exon2;Parent=Dca28033.1
scaffold2798	Augus-PASA	exon	16029	16226	.	-	.	ID=Dca28033.1.exon3;Parent=Dca28033.1
scaffold2798	Augus-PASA	exon	16741	16896	.	-	.	ID=Dca28033.1.exon4;Parent=Dca28033.1
scaffold2798	Augus-PASA	exon	18289	18459	.	-	.	ID=Dca28033.1.exon5;Parent=Dca28033.1
scaffold2798	Augus-PASA	exon	18626	18689	.	-	.	ID=Dca28033.1.exon6;Parent=Dca28033.1