Carnation DB

Dca2826.1

Annotation

6-exons
f-1
sp|B9SZ41_RICCO#Root phototropism protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0212780#GO:0004871;GO:0009416#1F1P0C
Repeat List (scaffold11)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2826.1	19	600	600	55	582	55	0
Target_name	Start	End	Length	Cov(%)
sp\|B9SZ41_RICCO	45	643	643	93.15

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2826.1	26	572	600	49.16	547	53	3e-163
Target_name	Start	End	Length	Cov(%)
AT5G10250.1	31	571	607	89.12

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11	Augustus	mRNA	301322	303562	.	-	.	ID=Dca2826.1;Parent=Dca2826
scaffold11	Augustus	exon	301322	301669	.	-	.	ID=Dca2826.1.exon1;Parent=Dca2826.1
scaffold11	Augustus	exon	301789	301917	.	-	.	ID=Dca2826.1.exon2;Parent=Dca2826.1
scaffold11	Augustus	exon	301984	302236	.	-	.	ID=Dca2826.1.exon3;Parent=Dca2826.1
scaffold11	Augustus	exon	302326	303212	.	-	.	ID=Dca2826.1.exon4;Parent=Dca2826.1
scaffold11	Augustus	exon	303301	303370	.	-	.	ID=Dca2826.1.exon5;Parent=Dca2826.1
scaffold11	Augustus	exon	303447	303562	.	-	.	ID=Dca2826.1.exon6;Parent=Dca2826.1