Carnation DB

Dca28282.1

Annotation

8-exons
f-1
sp|A9PAN0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_662670#GO:0003723#1F0P0C
sp|B3TLK5_CUCSA#Pseudouridine synthase and archaeosine transglycosylase-like protein#Cucumis sativus (Cucumber)#unknown#GO:0003723#1F0P0C
Repeat List (scaffold2817)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28282.1	1	181	181	87.84	181	88	3e-92
Target_name	Start	End	Length	Cov(%)
sp\|A9PAN0_POPTR	1	181	181	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28282.1	1	181	181	85.63	181	86	2e-90
Target_name	Start	End	Length	Cov(%)
AT1G09150.1	1	181	181	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2817	Augus-PASA	mRNA	25281	29956	.	-	.	ID=Dca28282.1;Parent=Dca28282
scaffold2817	Augus-PASA	exon	25281	25298	.	-	.	ID=Dca28282.1.exon1;Parent=Dca28282.1
scaffold2817	Augus-PASA	exon	25545	25608	.	-	.	ID=Dca28282.1.exon2;Parent=Dca28282.1
scaffold2817	Augus-PASA	exon	26270	26337	.	-	.	ID=Dca28282.1.exon3;Parent=Dca28282.1
scaffold2817	Augus-PASA	exon	27268	27404	.	-	.	ID=Dca28282.1.exon4;Parent=Dca28282.1
scaffold2817	Augus-PASA	exon	27886	27983	.	-	.	ID=Dca28282.1.exon5;Parent=Dca28282.1
scaffold2817	Augus-PASA	exon	28082	28149	.	-	.	ID=Dca28282.1.exon6;Parent=Dca28282.1
scaffold2817	Augus-PASA	exon	28243	28324	.	-	.	ID=Dca28282.1.exon7;Parent=Dca28282.1
scaffold2817	Augus-PASA	exon	29946	29956	.	-	.	ID=Dca28282.1.exon8;Parent=Dca28282.1