Carnation DB

Dca28520.1

Annotation

22-exons
f-1
sp|F6HC35_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0067g03110#GO:0005524;GO:0004672#2F0P0C
Os01t0819900-01 Armadillo-like helical domain containing protein.
Repeat List (scaffold2841)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28520.1	7	796	798	75.56	790	76	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HC35_VITVI	133	881	884	84.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28520.1	7	798	798	71.05	792	71	0
Target_name	Start	End	Length	Cov(%)
AT2G40730.1	43	798	798	94.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2841	Augus-PASA	mRNA	24222	41508	.	-	.	ID=Dca28520.1;Parent=Dca28520
scaffold2841	Augus-PASA	exon	24222	24475	.	-	.	ID=Dca28520.1.exon1;Parent=Dca28520.1
scaffold2841	Augus-PASA	exon	25123	25410	.	-	.	ID=Dca28520.1.exon2;Parent=Dca28520.1
scaffold2841	Augus-PASA	exon	25913	26022	.	-	.	ID=Dca28520.1.exon3;Parent=Dca28520.1
scaffold2841	Augus-PASA	exon	26716	26777	.	-	.	ID=Dca28520.1.exon4;Parent=Dca28520.1
scaffold2841	Augus-PASA	exon	27920	27989	.	-	.	ID=Dca28520.1.exon5;Parent=Dca28520.1
scaffold2841	Augus-PASA	exon	28638	28737	.	-	.	ID=Dca28520.1.exon6;Parent=Dca28520.1
scaffold2841	Augus-PASA	exon	28856	28931	.	-	.	ID=Dca28520.1.exon7;Parent=Dca28520.1
scaffold2841	Augus-PASA	exon	29811	29885	.	-	.	ID=Dca28520.1.exon8;Parent=Dca28520.1
scaffold2841	Augus-PASA	exon	30037	30090	.	-	.	ID=Dca28520.1.exon9;Parent=Dca28520.1
scaffold2841	Augustus	exon	30606	30695	.	-	.	ID=Dca28520.1.exon10;Parent=Dca28520.1
scaffold2841	Augustus	exon	30899	31015	.	-	.	ID=Dca28520.1.exon11;Parent=Dca28520.1
scaffold2841	Augustus	exon	31153	31263	.	-	.	ID=Dca28520.1.exon12;Parent=Dca28520.1
scaffold2841	Augustus	exon	31355	31494	.	-	.	ID=Dca28520.1.exon13;Parent=Dca28520.1
scaffold2841	Augustus	exon	31669	31750	.	-	.	ID=Dca28520.1.exon14;Parent=Dca28520.1
scaffold2841	Augustus	exon	33152	33231	.	-	.	ID=Dca28520.1.exon15;Parent=Dca28520.1
scaffold2841	Augustus	exon	34874	34982	.	-	.	ID=Dca28520.1.exon16;Parent=Dca28520.1
scaffold2841	Augustus	exon	36079	36201	.	-	.	ID=Dca28520.1.exon17;Parent=Dca28520.1
scaffold2841	Augustus	exon	36823	36895	.	-	.	ID=Dca28520.1.exon18;Parent=Dca28520.1
scaffold2841	Augustus	exon	39166	39282	.	-	.	ID=Dca28520.1.exon19;Parent=Dca28520.1
scaffold2841	Augustus	exon	39379	39530	.	-	.	ID=Dca28520.1.exon20;Parent=Dca28520.1
scaffold2841	Augustus	exon	41211	41306	.	-	.	ID=Dca28520.1.exon21;Parent=Dca28520.1
scaffold2841	Augustus	exon	41491	41508	.	-	.	ID=Dca28520.1.exon22;Parent=Dca28520.1