Carnation DB

Dca28556.1

Annotation

7-exons
f-1
sp|F6HZL4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g03580#GO:0005634#0F0P1C
Os05t0196500-01 Transcription factor jumonji domain containing protein.
Repeat List (scaffold2848)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28556.1	92	662	771	35.53	571	45	2e-148
Target_name	Start	End	Length	Cov(%)
sp\|F6HZL4_VITVI	14	621	813	74.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28556.1	99	643	771	33.85	545	46	1e-145
Target_name	Start	End	Length	Cov(%)
Os05t0196500-01	120	678	1239	45.11

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2848	Augustus	mRNA	18385	23535	.	-	.	ID=Dca28556.1;Parent=Dca28556
scaffold2848	Augustus	exon	18385	19101	.	-	.	ID=Dca28556.1.exon1;Parent=Dca28556.1
scaffold2848	Augustus	exon	19421	19789	.	-	.	ID=Dca28556.1.exon2;Parent=Dca28556.1
scaffold2848	Augustus	exon	20076	20237	.	-	.	ID=Dca28556.1.exon3;Parent=Dca28556.1
scaffold2848	Augustus	exon	20699	20911	.	-	.	ID=Dca28556.1.exon4;Parent=Dca28556.1
scaffold2848	Augustus	exon	21014	21523	.	-	.	ID=Dca28556.1.exon5;Parent=Dca28556.1
scaffold2848	Augustus	exon	22041	22112	.	-	.	ID=Dca28556.1.exon6;Parent=Dca28556.1
scaffold2848	Augustus	exon	23263	23535	.	-	.	ID=Dca28556.1.exon7;Parent=Dca28556.1