Carnation DB

Dca28601.1

Annotation

5-exons
f-1
sp|A9P8P8_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0016021#0F0P1C
AT1G32400.1 | Symbols: TOM2A | tobamovirus multiplication 2A | chr1:11689393-11690873 REVERSE LENGTH=280
Repeat List (scaffold2850)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28601.1	5	233	233	63.94	229	58	6e-79
Target_name	Start	End	Length	Cov(%)
sp\|A9P8P8_POPTR	22	280	280	92.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28601.1	3	233	233	57.93	231	52	5e-68
Target_name	Start	End	Length	Cov(%)
AT1G32400.1	20	280	280	93.21

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2850	Augustus	mRNA	49480	53072	.	+	.	ID=Dca28601.1;Parent=Dca28601
scaffold2850	Augustus	exon	49480	49664	.	+	.	ID=Dca28601.1.exon1;Parent=Dca28601.1
scaffold2850	Augustus	exon	50573	50672	.	+	.	ID=Dca28601.1.exon2;Parent=Dca28601.1
scaffold2850	Augustus	exon	51830	51934	.	+	.	ID=Dca28601.1.exon3;Parent=Dca28601.1
scaffold2850	Augustus	exon	52106	52309	.	+	.	ID=Dca28601.1.exon4;Parent=Dca28601.1
scaffold2850	Augustus	exon	52965	53072	.	+	.	ID=Dca28601.1.exon5;Parent=Dca28601.1