Dca28659.1
Annotation
- 2-exons
- f-2
- sp|D7TK10_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0003g02860#unknown#0F0P0C
- AT4G18230.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharide biosynthesis protein Alg14 like (InterPro:IPR013969); Has 640 Blast hits to 640 proteins in 277 species: Archae - 4; Bacteria - 281; Metazoa - 94; Fungi - 127; Plants - 57; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). | chr4:10080521-10081710 REVERSE LENGTH=233
- Repeat List (scaffold28563)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28659.1 |
25 |
120 |
126 |
45.23 |
96 |
60 |
1e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7TK10_VITVI |
10 |
105 |
233 |
41.2 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28659.1 |
44 |
117 |
126 |
38.88 |
74 |
67 |
5e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G18230.1 |
30 |
103 |
233 |
31.75 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold28563 |
Augustus |
mRNA |
533 |
1171 |
. |
+ |
. |
ID=Dca28659.1;Parent=Dca28659 |
| scaffold28563 |
Augustus |
exon |
533 |
756 |
. |
+ |
. |
ID=Dca28659.1.exon1;Parent=Dca28659.1 |
| scaffold28563 |
Augustus |
exon |
1014 |
1171 |
. |
+ |
. |
ID=Dca28659.1.exon2;Parent=Dca28659.1 |
