Dca28678.1
Annotation
- 4-exons
- f-1
- sp|A9PB40_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_564435#GO:0005730;GO:0003723#1F0P1C
- Os02t0728600-01 Similar to H/ACA ribonucleoprotein complex subunit 2.
- Repeat List (scaffold286)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28678.1 |
3 |
157 |
157 |
80.89 |
155 |
82 |
5e-68
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9PB40_POPTR |
2 |
155 |
155 |
99.35 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28678.1 |
3 |
157 |
157 |
73.88 |
155 |
75 |
2e-63
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0728600-01 |
24 |
172 |
173 |
86.12 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold286 |
Augus-PASA |
mRNA |
4473 |
5939 |
. |
- |
. |
ID=Dca28678.1;Parent=Dca28678 |
| scaffold286 |
Augus-PASA |
exon |
4473 |
4634 |
. |
- |
. |
ID=Dca28678.1.exon1;Parent=Dca28678.1 |
| scaffold286 |
Augus-PASA |
exon |
4985 |
5090 |
. |
- |
. |
ID=Dca28678.1.exon2;Parent=Dca28678.1 |
| scaffold286 |
Augus-PASA |
exon |
5586 |
5655 |
. |
- |
. |
ID=Dca28678.1.exon3;Parent=Dca28678.1 |
| scaffold286 |
Augus-PASA |
exon |
5804 |
5939 |
. |
- |
. |
ID=Dca28678.1.exon4;Parent=Dca28678.1 |
