Dca28726.1
Annotation
- 4-exons
- f-1
- sp|Q6L428_SOLDE#Putative integrase, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_26t00011#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold2864)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28726.1 |
1 |
157 |
372 |
17.47 |
157 |
42 |
2e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L428_SOLDE |
1336 |
1468 |
1609 |
8.26 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28726.1 |
1 |
151 |
372 |
12.36 |
151 |
31 |
6e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0627900-01 |
100 |
226 |
230 |
55.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2864 |
Augustus |
mRNA |
49157 |
57981 |
. |
- |
. |
ID=Dca28726.1;Parent=Dca28726 |
| scaffold2864 |
Augustus |
exon |
49157 |
49731 |
. |
- |
. |
ID=Dca28726.1.exon1;Parent=Dca28726.1 |
| scaffold2864 |
Augustus |
exon |
55121 |
55204 |
. |
- |
. |
ID=Dca28726.1.exon2;Parent=Dca28726.1 |
| scaffold2864 |
Augustus |
exon |
55816 |
56050 |
. |
- |
. |
ID=Dca28726.1.exon3;Parent=Dca28726.1 |
| scaffold2864 |
Augustus |
exon |
57757 |
57981 |
. |
- |
. |
ID=Dca28726.1.exon4;Parent=Dca28726.1 |
