Carnation DB

Dca28739.1

Annotation

6-exons
f-1
sp|B9H4L4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_558455#GO:0015031#0F1P0C
AT5G09260.1 | Symbols: VPS20.2 | vacuolar protein sorting-associated protein 20.2 | chr5:2876797-2878355 FORWARD LENGTH=216
Repeat List (scaffold2867)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28739.1	1	224	224	74.55	224	75	5e-86
Target_name	Start	End	Length	Cov(%)
sp\|B9H4L4_POPTR	1	222	222	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28739.1	1	224	224	75	224	75	2e-87
Target_name	Start	End	Length	Cov(%)
AT5G09260.1	1	216	216	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2867	Augustus	mRNA	3739	6432	.	-	.	ID=Dca28739.1;Parent=Dca28739
scaffold2867	Augustus	exon	3739	3764	.	-	.	ID=Dca28739.1.exon1;Parent=Dca28739.1
scaffold2867	Augustus	exon	3986	4142	.	-	.	ID=Dca28739.1.exon2;Parent=Dca28739.1
scaffold2867	Augustus	exon	4227	4310	.	-	.	ID=Dca28739.1.exon3;Parent=Dca28739.1
scaffold2867	Augustus	exon	4861	5013	.	-	.	ID=Dca28739.1.exon4;Parent=Dca28739.1
scaffold2867	Augustus	exon	5115	5267	.	-	.	ID=Dca28739.1.exon5;Parent=Dca28739.1
scaffold2867	Augustus	exon	6331	6432	.	-	.	ID=Dca28739.1.exon6;Parent=Dca28739.1