Carnation DB

Dca28830.1

Annotation

10-exons
f-1
sp|B9GSR0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_816159#GO:0016491#1F0P0C
AT1G06690.1 | Symbols: | NAD(P)-linked oxidoreductase superfamily protein | chr1:2049742-2052039 REVERSE LENGTH=377
Repeat List (scaffold2878)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28830.1	9	383	383	72.32	375	74	9e-166
Target_name	Start	End	Length	Cov(%)
sp\|B9GSR0_POPTR	2	372	372	99.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28830.1	26	383	383	70.75	358	76	1e-163
Target_name	Start	End	Length	Cov(%)
AT1G06690.1	20	377	377	94.96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2878	Augus-PASA	mRNA	48412	52076	.	+	.	ID=Dca28830.1;Parent=Dca28830
scaffold2878	Augus-PASA	exon	48412	48670	.	+	.	ID=Dca28830.1.exon1;Parent=Dca28830.1
scaffold2878	Augus-PASA	exon	49621	49712	.	+	.	ID=Dca28830.1.exon2;Parent=Dca28830.1
scaffold2878	Augus-PASA	exon	49817	49857	.	+	.	ID=Dca28830.1.exon3;Parent=Dca28830.1
scaffold2878	Augus-PASA	exon	50079	50243	.	+	.	ID=Dca28830.1.exon4;Parent=Dca28830.1
scaffold2878	Augus-PASA	exon	50401	50423	.	+	.	ID=Dca28830.1.exon5;Parent=Dca28830.1
scaffold2878	Augus-PASA	exon	50509	50580	.	+	.	ID=Dca28830.1.exon6;Parent=Dca28830.1
scaffold2878	Augus-PASA	exon	50724	50891	.	+	.	ID=Dca28830.1.exon7;Parent=Dca28830.1
scaffold2878	Augus-PASA	exon	51496	51578	.	+	.	ID=Dca28830.1.exon8;Parent=Dca28830.1
scaffold2878	Augus-PASA	exon	51669	51731	.	+	.	ID=Dca28830.1.exon9;Parent=Dca28830.1
scaffold2878	Augus-PASA	exon	51891	52076	.	+	.	ID=Dca28830.1.exon10;Parent=Dca28830.1