Dca28842.1
Annotation
- 2-exons
- f-1
- sp|F4NCH8_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- sp|Q2QQV8_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g29700#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
- Repeat List (scaffold288)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28842.1 |
1 |
1178 |
1194 |
34.75 |
1178 |
34 |
1e-173
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCH8_BETVU |
139 |
1346 |
1365 |
88.49 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28842.1 |
2 |
810 |
1194 |
22.11 |
809 |
33 |
9e-111
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
62 |
850 |
857 |
92.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold288 |
Augustus |
mRNA |
34619 |
38350 |
. |
+ |
. |
ID=Dca28842.1;Parent=Dca28842 |
| scaffold288 |
Augustus |
exon |
34619 |
37546 |
. |
+ |
. |
ID=Dca28842.1.exon1;Parent=Dca28842.1 |
| scaffold288 |
Augustus |
exon |
37694 |
38350 |
. |
+ |
. |
ID=Dca28842.1.exon2;Parent=Dca28842.1 |
